Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.45□□□□□ -0.42
CD3DP04234 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.45□□□□□ -0.42
CD3DP04234 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 AC004461.1-201ENST00000412461 403 ntBASIC12.45□□□□□ -0.42
CD3DP04234 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 TLE1P1-201ENST00000422965 589 ntBASIC12.45□□□□□ -0.42
CD3DP04234 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.45□□□□□ -0.42
CD3DP04234 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.45□□□□□ -0.42
CD3DP04234 AC026434.2-201ENST00000506094 1078 ntBASIC12.45□□□□□ -0.42
CD3DP04234 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.45□□□□□ -0.42
CD3DP04234 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 TIMM17BP1-201ENST00000545713 516 ntBASIC12.45□□□□□ -0.42
CD3DP04234 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.45□□□□□ -0.42
CD3DP04234 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD3DP04234 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.45□□□□□ -0.42
CD3DP04234 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CD3DP04234 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 SPDYE7P-202ENST00000420373 878 ntBASIC12.44□□□□□ -0.42
CD3DP04234 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CD3DP04234 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 AC107373.2-201ENST00000607735 490 ntBASIC12.44□□□□□ -0.42
CD3DP04234 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 TEX28P1-201ENST00000613479 1221 ntBASIC12.44□□□□□ -0.42
CD3DP04234 TEX28P2-201ENST00000617764 1221 ntBASIC12.44□□□□□ -0.42
CD3DP04234 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 AL158212.4-201ENST00000624062 1286 ntBASIC12.44□□□□□ -0.42
CD3DP04234 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.44□□□□□ -0.42
CD3DP04234 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD3DP04234 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD3DP04234 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms