Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.75■□□□□ 0.11
CHRNA1P02708 AL512306.1-201ENST00000432698 848 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.75■□□□□ 0.11
CHRNA1P02708 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 AC138701.2-201ENST00000553634 226 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 HERC2P11-201ENST00000562845 725 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 AC100756.2-201ENST00000569537 736 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.75■□□□□ 0.11
CHRNA1P02708 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHRNA1P02708 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHRNA1P02708 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.75■□□□□ 0.11
CHRNA1P02708 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.75■□□□□ 0.11
CHRNA1P02708 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHRNA1P02708 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHRNA1P02708 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC092384.3-202ENST00000564646 2873 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.74■□□□□ 0.11
CHRNA1P02708 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 RNA5SP417-201ENST00000516459 108 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.74■□□□□ 0.11
CHRNA1P02708 AC009145.4-201ENST00000625119 1294 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 LINC01815-202ENST00000641468 1409 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 AL136379.1-201ENST00000623471 2642 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHRNA1P02708 AGGF1P1-201ENST00000509500 2073 ntBASIC15.74■□□□□ 0.11
CHRNA1P02708 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.74■□□□□ 0.11
CHRNA1P02708 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHRNA1P02708 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
CHRNA1P02708 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHRNA1P02708 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHRNA1P02708 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms