Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.63■□□□□ 0.25
SMC2O95347 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SMC2O95347 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SMC2O95347 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.63■□□□□ 0.25
SMC2O95347 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SMC2O95347 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SMC2O95347 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SMC2O95347 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.63■□□□□ 0.25
SMC2O95347 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.63■□□□□ 0.25
SMC2O95347 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMC2O95347 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.62■□□□□ 0.25
SMC2O95347 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 AC020910.6-201ENST00000623084 1459 ntBASIC16.62■□□□□ 0.25
SMC2O95347 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.62■□□□□ 0.25
SMC2O95347 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 AC105206.1-202ENST00000314927 2368 ntBASIC16.62■□□□□ 0.25
SMC2O95347 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 AC092183.1-201ENST00000469884 875 ntBASIC16.62■□□□□ 0.25
SMC2O95347 ELK1P1-201ENST00000485699 580 ntBASIC16.62■□□□□ 0.25
SMC2O95347 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.62■□□□□ 0.25
SMC2O95347 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.62■□□□□ 0.25
SMC2O95347 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.62■□□□□ 0.25
SMC2O95347 CU634019.7-201ENST00000624153 1185 ntBASIC16.62■□□□□ 0.25
SMC2O95347 FP236241.2-201ENST00000624906 1185 ntBASIC16.62■□□□□ 0.25
SMC2O95347 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 CICP16-201ENST00000502609 2813 ntBASIC16.62■□□□□ 0.25
SMC2O95347 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMC2O95347 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.62■□□□□ 0.25
SMC2O95347 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.61■□□□□ 0.25
SMC2O95347 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SMC2O95347 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SMC2O95347 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 TCAM1P-207ENST00000485295 1537 ntBASIC16.61■□□□□ 0.25
SMC2O95347 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 KRT8P24-201ENST00000560290 1559 ntBASIC16.61■□□□□ 0.25
SMC2O95347 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.61■□□□□ 0.25
SMC2O95347 TSPY16P-201ENST00000449843 468 ntBASIC16.61■□□□□ 0.25
SMC2O95347 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 AC022137.2-201ENST00000503482 481 ntBASIC16.61■□□□□ 0.25
SMC2O95347 GCOM2-201ENST00000509133 1104 ntBASIC16.61■□□□□ 0.25
SMC2O95347 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.61■□□□□ 0.25
SMC2O95347 GPALPP1-207ENST00000611650 899 ntBASIC16.61■□□□□ 0.25
SMC2O95347 AJ011932.1-201ENST00000621707 465 ntBASIC16.61■□□□□ 0.25
SMC2O95347 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SMC2O95347 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC16.61■□□□□ 0.25
SMC2O95347 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SMC2O95347 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.61■□□□□ 0.25
SMC2O95347 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMC2O95347 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMC2O95347 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMC2O95347 AC215219.1-201ENST00000400706 1817 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms