Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.77■□□□□ 0.6
LTN1O94822 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.77■□□□□ 0.6
LTN1O94822 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LTN1O94822 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18.77■□□□□ 0.6
LTN1O94822 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.77■□□□□ 0.59
LTN1O94822 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
LTN1O94822 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTN1O94822 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LTN1O94822 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 AC083801.1-201ENST00000491689 358 ntBASIC18.76■□□□□ 0.59
LTN1O94822 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.76■□□□□ 0.59
LTN1O94822 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 AL359219.1-201ENST00000556311 934 ntBASIC18.76■□□□□ 0.59
LTN1O94822 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.76■□□□□ 0.59
LTN1O94822 AP003392.6-201ENST00000607709 325 ntBASIC18.76■□□□□ 0.59
LTN1O94822 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.76■□□□□ 0.59
LTN1O94822 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.76■□□□□ 0.59
LTN1O94822 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 PES1P2-201ENST00000449745 1735 ntBASIC18.76■□□□□ 0.59
LTN1O94822 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LTN1O94822 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LTN1O94822 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.76■□□□□ 0.59
LTN1O94822 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LTN1O94822 IGHEP2-201ENST00000519308 1256 ntBASIC18.76■□□□□ 0.59
LTN1O94822 CES1P2-201ENST00000566467 1242 ntBASIC18.76■□□□□ 0.59
LTN1O94822 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LTN1O94822 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LTN1O94822 AP000769.1-203ENST00000637245 208 ntBASIC18.76■□□□□ 0.59
LTN1O94822 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTN1O94822 AC113367.3-201ENST00000508316 1912 ntBASIC18.75■□□□□ 0.59
LTN1O94822 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
LTN1O94822 AC012617.1-204ENST00000586340 2305 ntBASIC18.75■□□□□ 0.59
LTN1O94822 HSPA8P5-201ENST00000456928 2069 ntBASIC18.75■□□□□ 0.59
LTN1O94822 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 OR7E115P-201ENST00000382617 1024 ntBASIC18.75■□□□□ 0.59
LTN1O94822 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.75■□□□□ 0.59
LTN1O94822 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18.75■□□□□ 0.59
LTN1O94822 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 AC092903.1-201ENST00000466506 262 ntBASIC18.75■□□□□ 0.59
LTN1O94822 AC063952.3-201ENST00000467756 308 ntBASIC18.75■□□□□ 0.59
LTN1O94822 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.75■□□□□ 0.59
LTN1O94822 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.75■□□□□ 0.59
LTN1O94822 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.75■□□□□ 0.59
LTN1O94822 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LTN1O94822 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.74■□□□□ 0.59
LTN1O94822 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LTN1O94822 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.74■□□□□ 0.59
LTN1O94822 TYMSP2-201ENST00000589501 424 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms