Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.56□□□□□ -0.24
IDH3BO43837 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IDH3BO43837 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.56□□□□□ -0.24
IDH3BO43837 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
IDH3BO43837 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 AP001267.2-201ENST00000532619 2086 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IDH3BO43837 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 AP001972.5-201ENST00000624624 2338 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IDH3BO43837 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 AC055876.3-201ENST00000431496 288 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 AL589987.1-201ENST00000453380 819 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.55□□□□□ -0.24
IDH3BO43837 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.55□□□□□ -0.24
IDH3BO43837 DUX4L47-201ENST00000566374 394 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 AC008738.7-201ENST00000609744 511 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 AC138649.4-201ENST00000612222 287 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 AL662799.1-202ENST00000614205 422 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 BX539320.1-201ENST00000623759 877 ntBASIC13.55□□□□□ -0.24
IDH3BO43837 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
IDH3BO43837 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
IDH3BO43837 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IDH3BO43837 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.55□□□□□ -0.24
IDH3BO43837 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms