Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BOLA2-SMG1P6H3BVE0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC020763.3-201ENST00000625095 2904 ntBASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PMPCAP1-201ENST00000508114 1576 ntBASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 UPK3BP1-201ENST00000428678 509 ntBASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.76□□□□□ -0.37
BOLA2-SMG1P6H3BVE0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 349.6 ms