Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC013355.1-201ENST00000562625 723 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC009955.4-201ENST00000597192 544 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 CU633904.3-201ENST00000624042 1029 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC138627.1-207ENST00000641560 1006 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 TUBBP5-203ENST00000508529 1334 ntBASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA3F8WFD2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC003102.2-201ENST00000589195 1469 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC106881.1-201ENST00000605849 3329 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 UPF3AP2-201ENST00000457924 1132 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC245884.6-201ENST00000515672 1067 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC022217.1-201ENST00000521069 738 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MIR4783-201ENST00000580343 82 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AC106872.11-201ENST00000605838 421 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AP001505.2-201ENST00000616815 443 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 AL136295.7-201ENST00000619226 1200 ntBASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA3F8WFD2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms