Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AL591846.1-201ENST00000451736 433 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 HIST2H2BC-201ENST00000498492 580 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC100827.2-201ENST00000563214 1194 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 AC244394.1-201ENST00000435000 1665 ntBASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAI2Q9Y5P3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 SCARNA20.5-201ENST00000516991 142 ntBASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AC104982.3-201ENST00000581995 514 ntBASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 BX640514.1-201ENST00000583223 1918 ntBASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.82□□□□□ -0.04
RAI2Q9Y5P3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAI2Q9Y5P3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms