Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 TMEM198B-204ENST00000484016 896 ntBASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 TMBIM7P-202ENST00000641474 1516 ntBASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 AC022532.1-201ENST00000624563 1728 ntBASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTDP1Q9Y5B0 CYP4F23P-201ENST00000593402 1579 ntBASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTDP1Q9Y5B0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC006453.1-201ENST00000636037 1257 ntBASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC018629.1-201ENST00000623381 1736 ntBASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AHCYP4-201ENST00000419201 1315 ntBASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTDP1Q9Y5B0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AC015688.4-201ENST00000580780 1647 ntBASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTDP1Q9Y5B0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms