Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AL355864.2-201ENST00000447420 863 ntBASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AC027307.3-201ENST00000594262 1100 ntBASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AGGF1P1-201ENST00000509500 2073 ntBASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR1DQ9Y2S0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC134312.5-201ENST00000568031 1313 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 DGCR5-201ENST00000399539 862 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC245100.3-201ENST00000441281 285 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 CRB3P1-201ENST00000449338 276 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC068587.3-201ENST00000526613 355 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC003102.2-201ENST00000589195 1469 ntBASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR1DQ9Y2S0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms