Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 MBP-238ENST00000580402 915 ntTSL 5 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PHF8Q9UPP1 PDXDC2P-206ENST00000534700 1315 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AC092573.1-201ENST00000433054 884 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 VENTXP4-201ENST00000449029 958 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 PRSS3P1-201ENST00000503996 742 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 EEF1GP8-201ENST00000506566 1154 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AC092862.1-201ENST00000541534 533 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 AC104506.1-201ENST00000609247 429 ntBASIC19.52■□□□□ 0.72
PHF8Q9UPP1 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PHF8Q9UPP1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PHF8Q9UPP1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PHF8Q9UPP1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PHF8Q9UPP1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PHF8Q9UPP1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 RN7SKP155-201ENST00000516031 288 ntBASIC19.51■□□□□ 0.71
PHF8Q9UPP1 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 COQ4-204ENST00000608951 781 ntTSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PHF8Q9UPP1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AC004554.1-201ENST00000422830 1468 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AL357373.1-201ENST00000394974 322 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AP000354.1-201ENST00000396982 456 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 MYADML-201ENST00000474610 2147 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AC068831.5-201ENST00000557387 328 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 AP003400.6-201ENST00000624698 740 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 PPT1-215ENST00000641471 2368 ntBASIC19.5■□□□□ 0.71
PHF8Q9UPP1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PHF8Q9UPP1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms