Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CALCOCO1Q9P1Z2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CALCOCO1Q9P1Z2 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.14■□□□□ 0.18
CALCOCO1Q9P1Z2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CALCOCO1Q9P1Z2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.14■□□□□ 0.18
CALCOCO1Q9P1Z2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AC022210.1-201ENST00000449856 793 ntBASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AC092552.1-201ENST00000547243 906 ntBASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CALCOCO1Q9P1Z2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 AC007389.4-201ENST00000454674 793 ntBASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 TMEM261P1-201ENST00000604899 340 ntBASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CALCOCO1Q9P1Z2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms