Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 SBF1P1-201ENST00000444527 5631 ntBASIC14.45□□□□□ -0.1
MKS1Q9NXB0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.45□□□□□ -0.1
MKS1Q9NXB0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AL359845.1-201ENST00000458202 1648 ntBASIC14.44□□□□□ -0.1
MKS1Q9NXB0 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC011495.1-201ENST00000498085 584 ntBASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 RN7SL48P-201ENST00000579283 293 ntBASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MKS1Q9NXB0 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC009093.2-202ENST00000620513 2079 ntBASIC14.43□□□□□ -0.1
MKS1Q9NXB0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC098850.1-201ENST00000419919 790 ntBASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms