Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
AMBRA1Q9C0C7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.77□□□□□ -0.21
AMBRA1Q9C0C7 AGAP10P-201ENST00000454844 2418 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC011840.2-201ENST00000563063 1520 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 EIF3FP3-201ENST00000434851 1086 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC114812.1-204ENST00000449669 728 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 GPR53P-205ENST00000457298 1084 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 RN7SL692P-201ENST00000464677 288 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AP001582.1-201ENST00000525856 295 ntBASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AMBRA1Q9C0C7 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 AL136172.1-201ENST00000598590 1394 ntBASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TLE1P1-201ENST00000422965 589 ntBASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 AC134915.1-201ENST00000426461 574 ntBASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms