Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 BASP1P1-201ENST00000430708 665 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC093004.1-201ENST00000508850 424 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC092552.1-201ENST00000547243 906 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC123567.1-201ENST00000548294 1261 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC093726.1-201ENST00000608064 963 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AL603764.1-201ENST00000636452 321 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC099521.3-201ENST00000624251 2938 ntBASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HDHD3Q9BSH5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC005562.1-201ENST00000583030 3219 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ACTBP8-201ENST00000403258 1108 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 GCOM2-201ENST00000509133 1104 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC099568.2-201ENST00000609194 695 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 MIR6074-201ENST00000612054 107 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AP005019.2-201ENST00000615104 511 ntBASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms