Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 AC074386.1-202ENST00000463561 864 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 KRT18P43-201ENST00000469825 1281 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PRELID1P1-202ENST00000567272 903 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MIR6074-201ENST00000612054 107 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.43□□□□□ -0.42
SEC22CQ9BRL7 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC022497.1-201ENST00000624916 3691 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC136604.1-202ENST00000425471 771 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 HLA-K-203ENST00000430151 1046 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC004066.1-201ENST00000502488 802 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 BANF1P1-201ENST00000553684 263 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 AL022323.5-201ENST00000624101 2059 ntBASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SEC22CQ9BRL7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms