Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.77□□□□□ -0.04
NDNQ99608 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.77□□□□□ -0.04
NDNQ99608 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.77□□□□□ -0.04
NDNQ99608 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NDNQ99608 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NDNQ99608 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.77□□□□□ -0.04
NDNQ99608 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
NDNQ99608 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.77□□□□□ -0.04
NDNQ99608 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NDNQ99608 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NDNQ99608 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.77□□□□□ -0.05
NDNQ99608 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 AP006294.1-201ENST00000415407 339 ntBASIC14.77□□□□□ -0.05
NDNQ99608 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.77□□□□□ -0.05
NDNQ99608 AC245100.3-201ENST00000441281 285 ntBASIC14.77□□□□□ -0.05
NDNQ99608 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.77□□□□□ -0.05
NDNQ99608 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.77□□□□□ -0.05
NDNQ99608 AC106760.1-201ENST00000508690 800 ntBASIC14.77□□□□□ -0.05
NDNQ99608 AC068587.3-201ENST00000526613 355 ntBASIC14.77□□□□□ -0.05
NDNQ99608 PTP4A1P2-201ENST00000546033 454 ntBASIC14.77□□□□□ -0.05
NDNQ99608 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.77□□□□□ -0.05
NDNQ99608 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.77□□□□□ -0.05
NDNQ99608 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 AC092364.2-202ENST00000597012 1073 ntBASIC14.77□□□□□ -0.05
NDNQ99608 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.77□□□□□ -0.05
NDNQ99608 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NDNQ99608 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.77□□□□□ -0.05
NDNQ99608 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NDNQ99608 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NDNQ99608 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.76□□□□□ -0.05
NDNQ99608 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 MRPL37P1-201ENST00000592451 1337 ntBASIC14.76□□□□□ -0.05
NDNQ99608 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.76□□□□□ -0.05
NDNQ99608 POM121L8P-201ENST00000417732 1281 ntBASIC14.76□□□□□ -0.05
NDNQ99608 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 ACTG1P3-201ENST00000431775 1114 ntBASIC14.76□□□□□ -0.05
NDNQ99608 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 HMGN1P19-201ENST00000436976 333 ntBASIC14.76□□□□□ -0.05
NDNQ99608 POM121L9P-203ENST00000441984 1285 ntBASIC14.76□□□□□ -0.05
NDNQ99608 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.76□□□□□ -0.05
NDNQ99608 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.76□□□□□ -0.05
NDNQ99608 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.76□□□□□ -0.05
NDNQ99608 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NDNQ99608 AL138709.1-201ENST00000614840 1693 ntBASIC14.76□□□□□ -0.05
NDNQ99608 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NDNQ99608 AC015688.4-201ENST00000580780 1647 ntBASIC14.76□□□□□ -0.05
NDNQ99608 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NDNQ99608 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms