Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 AC004066.1-201ENST00000502488 802 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 DUX4L27-201ENST00000554796 1261 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 CLK3P2-201ENST00000427566 1453 ntBASIC13.07□□□□□ -0.32
RFT1Q96AA3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
RFT1Q96AA3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RFT1Q96AA3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 STRCP1-201ENST00000509801 5328 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC241585.1-201ENST00000433527 519 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC114501.2-201ENST00000439631 535 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 MIR497HG-202ENST00000572453 3838 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AL360270.3-201ENST00000609118 1348 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC012617.1-204ENST00000586340 2305 ntBASIC13.06□□□□□ -0.32
RFT1Q96AA3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.06□□□□□ -0.32
RFT1Q96AA3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RFT1Q96AA3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms