Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AC009474.1-201ENST00000455096 1565 ntBASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.59□□□□□ -0.07
CKAP2Q8WWK9 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 AL445209.1-201ENST00000607269 3491 ntBASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 AL355102.3-201ENST00000554299 1678 ntBASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.58□□□□□ -0.07
CKAP2Q8WWK9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 UPF3AP3-201ENST00000420996 769 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 HLA-V-204ENST00000476601 1289 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AC022616.1-201ENST00000518688 554 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 TIMM17BP1-201ENST00000545713 516 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AL391069.4-201ENST00000609583 481 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AP001002.3-201ENST00000623482 206 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AC004840.1-201ENST00000636359 365 ntBASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CKAP2Q8WWK9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 SPDYE7P-202ENST00000420373 878 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 CEND1P1-201ENST00000451006 455 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 GCOM2-201ENST00000509133 1104 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AC092337.1-201ENST00000568699 1129 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AC139530.3-201ENST00000620344 690 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AL022313.4-201ENST00000562756 2046 ntBASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms