Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 NORAD-201ENST00000565493 5339 ntBASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD1Q8NHV4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NEDD1Q8NHV4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.89■□□□□ 0.3
NEDD1Q8NHV4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.89■□□□□ 0.3
NEDD1Q8NHV4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 CCT8L1P-201ENST00000465400 1674 ntBASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 AC091046.1-201ENST00000331871 207 ntBASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 MIR3677-201ENST00000578964 60 ntBASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 LINC02228-204ENST00000642115 2962 ntBASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
NEDD1Q8NHV4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 KRT8P31-201ENST00000504812 1408 ntBASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 EEF1DP6-201ENST00000449232 372 ntBASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD1Q8NHV4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms