Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 HSPA7-201ENST00000445535 1927 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AL136172.1-201ENST00000598590 1394 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AL359881.3-201ENST00000602640 1721 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 TLE1P1-201ENST00000422965 589 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 FAM8A4P-201ENST00000435433 1213 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 AP000593.2-201ENST00000542775 1433 ntBASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIMC1Q8NDZ2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AL354989.2-201ENST00000435838 1540 ntBASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 GCOM2-201ENST00000509133 1104 ntBASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms