Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RN7SL752P-201ENST00000463779 287 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 GCOM2-201ENST00000509133 1104 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC027307.3-201ENST00000594262 1100 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC138466.3-201ENST00000619983 221 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC011840.2-201ENST00000563063 1520 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 AC041040.2-201ENST00000622926 2899 ntBASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF439Q8NDP4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 HSPA7-201ENST00000445535 1927 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AL136172.1-201ENST00000598590 1394 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 MRPL37P1-201ENST00000592451 1337 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC007389.4-201ENST00000454674 793 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC011495.1-201ENST00000498085 584 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 AC025279.2-201ENST00000569730 653 ntBASIC12.19□□□□□ -0.46
ZNF439Q8NDP4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms