Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS8Q8N3P4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC090643.2-201ENST00000623442 2029 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 BX679664.3-201ENST00000414070 555 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AL512306.1-201ENST00000432698 848 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC113935.1-201ENST00000471722 555 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 ALG1L13P-202ENST00000519320 584 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 RN7SL665P-201ENST00000578793 300 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 HLA-DQB1-202ENST00000399079 1501 ntBASIC22.43■■□□□ 1.18
VPS8Q8N3P4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS8Q8N3P4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 MIR33B-201ENST00000385104 96 ntBASIC22.42■■□□□ 1.18
VPS8Q8N3P4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 AC098934.1-203ENST00000442868 1262 ntBASIC22.42■■□□□ 1.18
VPS8Q8N3P4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 FOS-204ENST00000554617 796 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 AC007881.3-201ENST00000608897 607 ntBASIC22.42■■□□□ 1.18
VPS8Q8N3P4 AC084781.1-201ENST00000613737 656 ntBASIC22.42■■□□□ 1.18
VPS8Q8N3P4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC22.42■■□□□ 1.18
VPS8Q8N3P4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS8Q8N3P4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 AC026316.1-201ENST00000398900 414 ntBASIC22.41■■□□□ 1.18
VPS8Q8N3P4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 TMEM198B-204ENST00000484016 896 ntBASIC22.41■■□□□ 1.18
VPS8Q8N3P4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 KRT8P43-201ENST00000406052 1458 ntBASIC22.41■■□□□ 1.18
VPS8Q8N3P4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
VPS8Q8N3P4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS8Q8N3P4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms