Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 HLF-202ENST00000430986 1385 ntTSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AC005722.1-201ENST00000431878 964 ntBASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 SRPK2P-201ENST00000523408 1100 ntBASIC19.98■□□□□ 0.79
UBR1Q8IWV7 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 RN7SL605P-201ENST00000577229 281 ntBASIC19.98■□□□□ 0.79
UBR1Q8IWV7 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBR1Q8IWV7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 AC103702.1-201ENST00000548801 2630 ntBASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CCL25-202ENST00000315626 450 ntTSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 FAM197Y6-201ENST00000420524 766 ntBASIC19.97■□□□□ 0.79
UBR1Q8IWV7 DPY19L2P4-201ENST00000479881 442 ntBASIC19.97■□□□□ 0.79
UBR1Q8IWV7 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.97■□□□□ 0.79
UBR1Q8IWV7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AC010086.2-201ENST00000428616 226 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 KRT18P15-201ENST00000458108 1291 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 TPT1P6-201ENST00000458298 514 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 GRAMD4P6-201ENST00000556999 244 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 PSME2-217ENST00000615264 874 ntTSL 5 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 AC106782.5-201ENST00000616011 337 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC19.96■□□□□ 0.79
UBR1Q8IWV7 PSME2-218ENST00000630027 185 ntTSL 3 BASIC19.96■□□□□ 0.79
UBR1Q8IWV7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 AL008638.4-201ENST00000624792 1315 ntBASIC19.95■□□□□ 0.78
UBR1Q8IWV7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 GH1-203ENST00000351388 685 ntTSL 2 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UBR1Q8IWV7 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms