Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 TMEM14DP-201ENST00000422205 345 ntBASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 USP32P1-208ENST00000506594 1164 ntBASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 KRT8P28-201ENST00000433288 1390 ntBASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC83Q8IWF9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC090643.2-201ENST00000623442 2029 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC092933.1-201ENST00000393644 945 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC004945.1-201ENST00000416738 983 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 FAM197Y7-201ENST00000432892 766 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 SLC25A47P1-201ENST00000531577 414 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC244669.2-201ENST00000612320 853 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC132938.4-201ENST00000623835 848 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 AL157996.1-201ENST00000624684 2299 ntBASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC83Q8IWF9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 AC111170.3-201ENST00000624282 2464 ntBASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC83Q8IWF9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms