Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC016700.1-201ENST00000429424 312 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 FNTAP2-201ENST00000430308 634 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC011742.3-201ENST00000439053 820 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 BX284668.4-201ENST00000453917 508 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AL132994.2-201ENST00000603120 687 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 MIR6074-201ENST00000612054 107 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC106881.1-201ENST00000605849 3329 ntBASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.36□□□□□ -0.11
LRRTM4Q86VH4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AL008707.1-201ENST00000422498 534 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC022217.1-201ENST00000521069 738 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC009779.1-201ENST00000551138 283 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 SORD2P-201ENST00000558556 1069 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC215219.1-201ENST00000400706 1817 ntBASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
LRRTM4Q86VH4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms