Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 LINC00115-201ENST00000473798 1317 ntBASIC18.13■□□□□ 0.49
SMIM5Q71RC9 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM5Q71RC9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 TMBIM7P-203ENST00000641617 1718 ntBASIC18.12■□□□□ 0.49
SMIM5Q71RC9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 MIR1301-201ENST00000408518 82 ntBASIC18.12■□□□□ 0.49
SMIM5Q71RC9 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 AC098934.1-203ENST00000442868 1262 ntBASIC18.12■□□□□ 0.49
SMIM5Q71RC9 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 RN7SL288P-201ENST00000490496 291 ntBASIC18.12■□□□□ 0.49
SMIM5Q71RC9 RN7SL121P-201ENST00000584223 273 ntBASIC18.12■□□□□ 0.49
SMIM5Q71RC9 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM5Q71RC9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 PPT1-215ENST00000641471 2368 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AC018529.2-202ENST00000611482 3087 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 BRI3P1-201ENST00000440440 378 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 RN7SL788P-201ENST00000460504 316 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AL160191.2-201ENST00000603975 601 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AC021016.3-201ENST00000608367 477 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AL109809.1-201ENST00000418979 1367 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 KRT8P18-201ENST00000413425 1445 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 AL365181.1-201ENST00000564032 1828 ntBASIC18.11■□□□□ 0.49
SMIM5Q71RC9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms