Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 RN7SKP230-201ENST00000365642 335 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 HSPB1P2-201ENST00000448722 546 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 BX284668.4-201ENST00000453917 508 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 MIR4722-201ENST00000578292 60 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 PPY2P-201ENST00000582808 702 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AC107918.4-201ENST00000641966 3141 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 AL365209.1-201ENST00000624418 6473 ntBASIC15.43■□□□□ 0.06
RNF43Q68DV7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.43■□□□□ 0.06
RNF43Q68DV7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC011474.4-201ENST00000623523 2076 ntBASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 LDHBP1-201ENST00000455730 1119 ntBASIC15.42■□□□□ 0.06
RNF43Q68DV7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 MIR4706-201ENST00000582134 82 ntBASIC15.42■□□□□ 0.06
RNF43Q68DV7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF43Q68DV7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 AC015802.1-201ENST00000588104 1449 ntBASIC15.42■□□□□ 0.06
RNF43Q68DV7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.42■□□□□ 0.06
RNF43Q68DV7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.41■□□□□ 0.06
RNF43Q68DV7 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.41■□□□□ 0.06
RNF43Q68DV7 AC079178.1-201ENST00000420915 656 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms