Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ST13P19-201ENST00000442505 1124 ntBASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 RN7SL555P-201ENST00000584742 339 ntBASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 AC107308.1-201ENST00000615897 301 ntBASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 AC051619.9-201ENST00000623237 597 ntBASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RNFT1Q5M7Z0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RNFT1Q5M7Z0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AL365209.1-201ENST00000624418 6473 ntBASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 BANF1P3-201ENST00000412556 261 ntBASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC124068.2-201ENST00000569473 1109 ntBASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 RN7SL121P-201ENST00000584223 273 ntBASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AL805961.1-201ENST00000642026 753 ntBASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNFT1Q5M7Z0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RNFT1Q5M7Z0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms