Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 AP003392.6-201ENST00000607709 325 ntBASIC17.82■□□□□ 0.44
CCDC93Q567U6 AC002044.2-201ENST00000624910 970 ntBASIC17.82■□□□□ 0.44
CCDC93Q567U6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC93Q567U6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC93Q567U6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC93Q567U6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC93Q567U6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC93Q567U6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A21P-201ENST00000510875 1396 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A15P-201ENST00000514465 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A6P-201ENST00000515148 1394 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A16P-201ENST00000526662 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A9P-201ENST00000527940 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A5P-201ENST00000528738 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A14P-201ENST00000530386 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FAM90A13P-201ENST00000534703 1395 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 TEKT4P2-202ENST00000559466 1312 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AQP7P5-201ENST00000428759 1049 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AQP7P4-201ENST00000447083 1042 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AQP7P2-201ENST00000453967 1041 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AC068867.1-201ENST00000559855 150 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 AQP7P3-201ENST00000624547 1041 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 AC009145.4-201ENST00000625119 1294 ntBASIC17.81■□□□□ 0.44
CCDC93Q567U6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC93Q567U6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC93Q567U6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AC087481.3-201ENST00000602886 1894 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AP002353.1-201ENST00000528257 1599 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 KRT17P4-201ENST00000429445 819 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 ST13P19-201ENST00000442505 1124 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 DDX39AP1-201ENST00000445147 1181 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 SIGLEC22P-201ENST00000599104 714 ntBASIC17.8■□□□□ 0.44
CCDC93Q567U6 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC93Q567U6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms