Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ANKRD55Q3KP44 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AC015688.4-201ENST00000580780 1647 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL031595.1-201ENST00000623969 4709 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 TUBB3P1-201ENST00000405796 1332 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL139385.1-201ENST00000611744 3272 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RPL37AP1-201ENST00000412502 279 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL512361.1-201ENST00000554200 418 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AC093028.1-201ENST00000622998 982 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AC004461.2-201ENST00000629517 803 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AL109936.8-201ENST00000641772 604 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AC118758.2-201ENST00000614242 2813 ntBASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ANKRD55Q3KP44 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 AP002761.4-201ENST00000565433 3361 ntBASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ANKRD55Q3KP44 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms