Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC20.48■□□□□ 0.87
CLTCQ00610 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC20.48■□□□□ 0.87
CLTCQ00610 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC20.48■□□□□ 0.87
CLTCQ00610 PRR20FP-201ENST00000603320 180 ntBASIC20.48■□□□□ 0.87
CLTCQ00610 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.48■□□□□ 0.87
CLTCQ00610 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.48■□□□□ 0.87
CLTCQ00610 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.47■□□□□ 0.87
CLTCQ00610 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
CLTCQ00610 AC138035.3-201ENST00000622706 2791 ntBASIC20.47■□□□□ 0.87
CLTCQ00610 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 AIG1-203ENST00000367596 559 ntTSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC20.47■□□□□ 0.87
CLTCQ00610 KRT18P33-201ENST00000398525 1043 ntBASIC20.47■□□□□ 0.87
CLTCQ00610 PHBP10-201ENST00000416467 784 ntBASIC20.47■□□□□ 0.87
CLTCQ00610 AC011431.1-201ENST00000512971 230 ntBASIC20.47■□□□□ 0.87
CLTCQ00610 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC20.47■□□□□ 0.87
CLTCQ00610 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLTCQ00610 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC20.47■□□□□ 0.87
CLTCQ00610 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC20.47■□□□□ 0.87
CLTCQ00610 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 AC048382.6-201ENST00000621980 1223 ntBASIC20.47■□□□□ 0.87
CLTCQ00610 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC20.47■□□□□ 0.87
CLTCQ00610 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLTCQ00610 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 PES1P2-201ENST00000449745 1735 ntBASIC20.46■□□□□ 0.87
CLTCQ00610 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.46■□□□□ 0.87
CLTCQ00610 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTCQ00610 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 TPT1P6-201ENST00000458298 514 ntBASIC20.46■□□□□ 0.87
CLTCQ00610 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 COQ10BP2-201ENST00000513804 724 ntBASIC20.46■□□□□ 0.87
CLTCQ00610 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTCQ00610 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC20.46■□□□□ 0.87
CLTCQ00610 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTCQ00610 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.46■□□□□ 0.87
CLTCQ00610 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLTCQ00610 AL139158.3-201ENST00000641212 1562 ntBASIC20.46■□□□□ 0.87
CLTCQ00610 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.46■□□□□ 0.87
CLTCQ00610 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLTCQ00610 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CLTCQ00610 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.45■□□□□ 0.86
CLTCQ00610 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 RN7SL605P-201ENST00000577229 281 ntBASIC20.45■□□□□ 0.86
CLTCQ00610 RN7SL440P-201ENST00000577855 343 ntBASIC20.45■□□□□ 0.86
CLTCQ00610 AC132812.1-201ENST00000583145 892 ntBASIC20.45■□□□□ 0.86
CLTCQ00610 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLTCQ00610 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 AC068760.1-201ENST00000493579 1953 ntBASIC20.45■□□□□ 0.86
CLTCQ00610 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.45■□□□□ 0.86
CLTCQ00610 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 AC064850.1-201ENST00000413279 1398 ntBASIC20.45■□□□□ 0.86
CLTCQ00610 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC20.45■□□□□ 0.86
CLTCQ00610 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLTCQ00610 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms