Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.94□□□□□ -0.18
SKP1P63208 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 AC027237.1-201ENST00000560942 655 ntBASIC13.94□□□□□ -0.18
SKP1P63208 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 AC104982.3-201ENST00000581995 514 ntBASIC13.94□□□□□ -0.18
SKP1P63208 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 AC009955.4-201ENST00000597192 544 ntBASIC13.94□□□□□ -0.18
SKP1P63208 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 MIR6720-201ENST00000611664 98 ntBASIC13.94□□□□□ -0.18
SKP1P63208 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.94□□□□□ -0.18
SKP1P63208 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 MTHFR-210ENST00000641407 2387 ntBASIC13.94□□□□□ -0.18
SKP1P63208 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.94□□□□□ -0.18
SKP1P63208 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.94□□□□□ -0.18
SKP1P63208 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.94□□□□□ -0.18
SKP1P63208 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SKP1P63208 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SKP1P63208 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SKP1P63208 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SKP1P63208 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.93□□□□□ -0.18
SKP1P63208 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.93□□□□□ -0.18
SKP1P63208 ACTBP11-201ENST00000436287 1126 ntBASIC13.93□□□□□ -0.18
SKP1P63208 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.93□□□□□ -0.18
SKP1P63208 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.93□□□□□ -0.18
SKP1P63208 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.93□□□□□ -0.18
SKP1P63208 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.93□□□□□ -0.18
SKP1P63208 AC007663.3-201ENST00000609632 465 ntBASIC13.93□□□□□ -0.18
SKP1P63208 AL162426.1-201ENST00000624141 743 ntBASIC13.93□□□□□ -0.18
SKP1P63208 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 AC113367.3-201ENST00000508316 1912 ntBASIC13.93□□□□□ -0.18
SKP1P63208 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.93□□□□□ -0.18
SKP1P63208 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms