Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 AL132994.2-201ENST00000603120 687 ntBASIC14.71□□□□□ -0.05
AP1S1P61966 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.71□□□□□ -0.05
AP1S1P61966 AC138649.2-201ENST00000615886 705 ntBASIC14.71□□□□□ -0.05
AP1S1P61966 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
AP1S1P61966 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
AP1S1P61966 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP1S1P61966 AC097359.2-201ENST00000604992 2389 ntBASIC14.71□□□□□ -0.05
AP1S1P61966 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
AP1S1P61966 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
AP1S1P61966 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP1S1P61966 AC136759.1-202ENST00000530858 2194 ntBASIC14.71□□□□□ -0.05
AP1S1P61966 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
AP1S1P61966 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S1P61966 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S1P61966 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.71□□□□□ -0.06
AP1S1P61966 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S1P61966 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.71□□□□□ -0.06
AP1S1P61966 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP1S1P61966 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 AHCYP4-201ENST00000419201 1315 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 AC015656.1-201ENST00000624209 3578 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 AC005912.2-201ENST00000619492 2400 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
AP1S1P61966 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 MIR1247-201ENST00000408206 136 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 GPAA1P2-201ENST00000417923 928 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 MARK2P5-201ENST00000507649 634 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 AC003686.1-201ENST00000550956 1034 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.7□□□□□ -0.06
AP1S1P61966 SNORD3B-2-202ENST00000571722 791 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 AC020914.3-201ENST00000594712 304 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 AL451050.2-201ENST00000606967 682 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 AC104506.1-201ENST00000609247 429 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 AC244452.3-201ENST00000636814 210 ntBASIC14.7□□□□□ -0.06
AP1S1P61966 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
AP1S1P61966 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP1S1P61966 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.7□□□□□ -0.06
AP1S1P61966 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S1P61966 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S1P61966 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S1P61966 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
AP1S1P61966 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S1P61966 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
AP1S1P61966 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S1P61966 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.69□□□□□ -0.06
AP1S1P61966 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S1P61966 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP1S1P61966 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms