Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SEC61A1P61619 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SEC61A1P61619 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SEC61A1P61619 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 AL133267.1-201ENST00000398220 340 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 C1QBPP1-201ENST00000400117 770 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 AC112492.5-201ENST00000421897 457 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.94□□□□□ -0.34
SEC61A1P61619 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
SEC61A1P61619 AC007389.4-201ENST00000454674 793 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.94□□□□□ -0.34
SEC61A1P61619 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.94□□□□□ -0.34
SEC61A1P61619 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 AC120045.2-201ENST00000567334 178 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.94□□□□□ -0.34
SEC61A1P61619 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC61A1P61619 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SEC61A1P61619 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC61A1P61619 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SEC61A1P61619 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SEC61A1P61619 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 AC015818.8-201ENST00000587907 1519 ntBASIC12.93□□□□□ -0.34
SEC61A1P61619 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 AC079776.1-201ENST00000401540 1152 ntBASIC12.93□□□□□ -0.34
SEC61A1P61619 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 SOCS2P1-201ENST00000417727 557 ntBASIC12.93□□□□□ -0.34
SEC61A1P61619 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC61A1P61619 AL162726.2-201ENST00000438986 1017 ntBASIC12.93□□□□□ -0.34
SEC61A1P61619 AC244107.1-201ENST00000442033 332 ntBASIC12.93□□□□□ -0.34
SEC61A1P61619 GPR53P-205ENST00000457298 1084 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms