Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.05■□□□□ 0.32
RHBDL3P58872 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.05■□□□□ 0.32
RHBDL3P58872 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.05■□□□□ 0.32
RHBDL3P58872 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.05■□□□□ 0.32
RHBDL3P58872 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.05■□□□□ 0.32
RHBDL3P58872 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.05■□□□□ 0.32
RHBDL3P58872 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RHBDL3P58872 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.05■□□□□ 0.32
RHBDL3P58872 MIR3180-2-201ENST00000581748 88 ntBASIC17.05■□□□□ 0.32
RHBDL3P58872 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.05■□□□□ 0.32
RHBDL3P58872 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RHBDL3P58872 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 AC006372.4-201ENST00000624122 1543 ntBASIC17.05■□□□□ 0.32
RHBDL3P58872 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 AC090505.1-201ENST00000430515 1834 ntBASIC17.05■□□□□ 0.32
RHBDL3P58872 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.05■□□□□ 0.32
RHBDL3P58872 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.05■□□□□ 0.32
RHBDL3P58872 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RHBDL3P58872 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 IL9RP3-201ENST00000442856 1674 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.04■□□□□ 0.32
RHBDL3P58872 AL591122.2-201ENST00000624125 1853 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
RHBDL3P58872 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RHBDL3P58872 Z69890.1-201ENST00000382990 339 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 AC079112.1-201ENST00000454972 939 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.04■□□□□ 0.32
RHBDL3P58872 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 AC007952.4-201ENST00000573866 637 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 AP001065.2-201ENST00000617205 644 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RHBDL3P58872 AC073911.3-201ENST00000624401 631 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 AL161773.1-201ENST00000624845 863 ntBASIC17.04■□□□□ 0.32
RHBDL3P58872 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.04■□□□□ 0.32
RHBDL3P58872 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.04■□□□□ 0.32
RHBDL3P58872 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHBDL3P58872 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RHBDL3P58872 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHBDL3P58872 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 DBET-201ENST00000630918 3363 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.03■□□□□ 0.32
RHBDL3P58872 LYPLA2P1-203ENST00000447689 696 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.03■□□□□ 0.32
RHBDL3P58872 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDL3P58872 AC005740.1-201ENST00000515639 522 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 AC138701.2-201ENST00000553634 226 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDL3P58872 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDL3P58872 MIR2392-201ENST00000584881 84 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms