Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PSMD4P55036 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
PSMD4P55036 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 MIR1202-201ENST00000408529 83 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 AC004945.1-201ENST00000416738 983 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 PUDPP3-201ENST00000445368 636 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 CROCCP4-201ENST00000457096 498 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.7□□□□□ -0.22
PSMD4P55036 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.7□□□□□ -0.22
PSMD4P55036 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.7□□□□□ -0.22
PSMD4P55036 AP005482.1-201ENST00000563722 1273 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.7□□□□□ -0.22
PSMD4P55036 AC008825.2-201ENST00000603374 718 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 MIR6074-201ENST00000612054 107 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.7□□□□□ -0.22
PSMD4P55036 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.7□□□□□ -0.22
PSMD4P55036 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PSMD4P55036 AC020910.5-201ENST00000623668 1865 ntBASIC13.7□□□□□ -0.22
PSMD4P55036 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.69□□□□□ -0.22
PSMD4P55036 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 U91328.1-201ENST00000437528 223 ntBASIC13.69□□□□□ -0.22
PSMD4P55036 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.69□□□□□ -0.22
PSMD4P55036 AL035414.1-201ENST00000451327 857 ntBASIC13.69□□□□□ -0.22
PSMD4P55036 HOMER2P2-201ENST00000451621 847 ntBASIC13.69□□□□□ -0.22
PSMD4P55036 ACA64.2-201ENST00000459014 129 ntBASIC13.69□□□□□ -0.22
PSMD4P55036 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PSMD4P55036 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.69□□□□□ -0.22
PSMD4P55036 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.69□□□□□ -0.22
PSMD4P55036 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 AC008687.7-202ENST00000637404 953 ntBASIC13.69□□□□□ -0.22
PSMD4P55036 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms