Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.71■□□□□ 0.43
NUP98P52948 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 HSPA8P5-201ENST00000456928 2069 ntBASIC17.71■□□□□ 0.43
NUP98P52948 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NUP98P52948 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 AC092573.1-201ENST00000433054 884 ntBASIC17.71■□□□□ 0.43
NUP98P52948 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.71■□□□□ 0.43
NUP98P52948 PRSS3P1-201ENST00000503996 742 ntBASIC17.71■□□□□ 0.43
NUP98P52948 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.71■□□□□ 0.43
NUP98P52948 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP98P52948 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.71■□□□□ 0.43
NUP98P52948 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.71■□□□□ 0.43
NUP98P52948 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
NUP98P52948 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 AC004554.1-201ENST00000422830 1468 ntBASIC17.71■□□□□ 0.43
NUP98P52948 AC007952.5-201ENST00000572818 1486 ntBASIC17.71■□□□□ 0.43
NUP98P52948 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP98P52948 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NUP98P52948 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NUP98P52948 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.71■□□□□ 0.42
NUP98P52948 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP98P52948 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NUP98P52948 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP98P52948 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP98P52948 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.7■□□□□ 0.42
NUP98P52948 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.7■□□□□ 0.42
NUP98P52948 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 AL118516.1-201ENST00000564152 670 ntBASIC17.7■□□□□ 0.42
NUP98P52948 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 AC097359.2-201ENST00000604992 2389 ntBASIC17.7■□□□□ 0.42
NUP98P52948 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 AL109809.1-201ENST00000418979 1367 ntBASIC17.7■□□□□ 0.42
NUP98P52948 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.7■□□□□ 0.42
NUP98P52948 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.7■□□□□ 0.42
NUP98P52948 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 TREHP1-201ENST00000531328 465 ntBASIC17.7■□□□□ 0.42
NUP98P52948 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.7■□□□□ 0.42
NUP98P52948 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NUP98P52948 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP98P52948 AL031673.1-201ENST00000611460 466 ntBASIC17.7■□□□□ 0.42
NUP98P52948 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP98P52948 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP98P52948 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NUP98P52948 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NUP98P52948 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.69■□□□□ 0.42
NUP98P52948 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NUP98P52948 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP98P52948 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NUP98P52948 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms