Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC098614.1-201ENST00000368528 745 ntBASIC16.08■□□□□ 0.16
USP8P40818 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.08■□□□□ 0.16
USP8P40818 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.08■□□□□ 0.16
USP8P40818 AC012441.1-201ENST00000446669 685 ntBASIC16.08■□□□□ 0.16
USP8P40818 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 RN7SL692P-201ENST00000464677 288 ntBASIC16.08■□□□□ 0.16
USP8P40818 AC011495.1-201ENST00000498085 584 ntBASIC16.08■□□□□ 0.16
USP8P40818 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.08■□□□□ 0.16
USP8P40818 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 AC068587.3-201ENST00000526613 355 ntBASIC16.08■□□□□ 0.16
USP8P40818 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.08■□□□□ 0.16
USP8P40818 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.08■□□□□ 0.16
USP8P40818 AL603764.1-201ENST00000636452 321 ntBASIC16.08■□□□□ 0.16
USP8P40818 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.08■□□□□ 0.16
USP8P40818 AC136759.1-202ENST00000530858 2194 ntBASIC16.08■□□□□ 0.16
USP8P40818 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
USP8P40818 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.08■□□□□ 0.16
USP8P40818 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
USP8P40818 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.08■□□□□ 0.16
USP8P40818 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.08■□□□□ 0.16
USP8P40818 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
USP8P40818 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
USP8P40818 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.08■□□□□ 0.16
USP8P40818 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 AL354702.1-201ENST00000442006 1960 ntBASIC16.07■□□□□ 0.16
USP8P40818 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
USP8P40818 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
USP8P40818 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 RN7SL837P-201ENST00000463010 287 ntBASIC16.07■□□□□ 0.16
USP8P40818 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.07■□□□□ 0.16
USP8P40818 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
USP8P40818 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.07■□□□□ 0.16
USP8P40818 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.07■□□□□ 0.16
USP8P40818 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.07■□□□□ 0.16
USP8P40818 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
USP8P40818 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP8P40818 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
USP8P40818 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.07■□□□□ 0.16
USP8P40818 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
USP8P40818 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
USP8P40818 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms