Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 HPD-204ENST00000543163 1709 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 AC090505.1-201ENST00000430515 1834 ntBASIC19.3■□□□□ 0.68
USP6P35125 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 OR6D1P-203ENST00000641209 4860 ntBASIC19.3■□□□□ 0.68
USP6P35125 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 KRT18P46-201ENST00000435568 1279 ntBASIC19.3■□□□□ 0.68
USP6P35125 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6P35125 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.3■□□□□ 0.68
USP6P35125 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.3■□□□□ 0.68
USP6P35125 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
USP6P35125 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.3■□□□□ 0.68
USP6P35125 AC104640.1-201ENST00000562617 2109 ntBASIC19.3■□□□□ 0.68
USP6P35125 AL359091.4-201ENST00000610052 409 ntBASIC19.3■□□□□ 0.68
USP6P35125 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6P35125 RPL13AP3-202ENST00000494676 1473 ntBASIC19.3■□□□□ 0.68
USP6P35125 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6P35125 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 AC117503.4-201ENST00000623229 1418 ntBASIC19.29■□□□□ 0.68
USP6P35125 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.29■□□□□ 0.68
USP6P35125 RN7SL494P-201ENST00000461517 304 ntBASIC19.29■□□□□ 0.68
USP6P35125 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.29■□□□□ 0.68
USP6P35125 PRSS3P1-201ENST00000503996 742 ntBASIC19.29■□□□□ 0.68
USP6P35125 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 VENTXP3-201ENST00000546480 773 ntBASIC19.29■□□□□ 0.68
USP6P35125 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.29■□□□□ 0.68
USP6P35125 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.29■□□□□ 0.68
USP6P35125 AL118516.1-201ENST00000564152 670 ntBASIC19.29■□□□□ 0.68
USP6P35125 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.29■□□□□ 0.68
USP6P35125 RN7SL596P-201ENST00000582123 288 ntBASIC19.29■□□□□ 0.68
USP6P35125 AC055811.3-201ENST00000584952 686 ntBASIC19.29■□□□□ 0.68
USP6P35125 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
USP6P35125 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6P35125 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6P35125 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
USP6P35125 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 AC023824.1-201ENST00000562945 2975 ntBASIC19.28■□□□□ 0.68
USP6P35125 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms