Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPS1P31327 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.02■□□□□ 0.8
CPS1P31327 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 SHMT1P1-201ENST00000419974 1312 ntBASIC20.02■□□□□ 0.8
CPS1P31327 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CPS1P31327 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.02■□□□□ 0.8
CPS1P31327 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC20.02■□□□□ 0.8
CPS1P31327 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.02■□□□□ 0.8
CPS1P31327 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.02■□□□□ 0.8
CPS1P31327 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.02■□□□□ 0.8
CPS1P31327 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.02■□□□□ 0.8
CPS1P31327 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.02■□□□□ 0.8
CPS1P31327 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CPS1P31327 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.02■□□□□ 0.8
CPS1P31327 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.02■□□□□ 0.8
CPS1P31327 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPS1P31327 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPS1P31327 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CPS1P31327 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.02■□□□□ 0.79
CPS1P31327 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPS1P31327 ABCD1P4-201ENST00000399687 604 ntBASIC20.02■□□□□ 0.79
CPS1P31327 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 AC092573.1-201ENST00000433054 884 ntBASIC20.02■□□□□ 0.79
CPS1P31327 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 RN7SL672P-201ENST00000474091 317 ntBASIC20.02■□□□□ 0.79
CPS1P31327 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CPS1P31327 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC20.02■□□□□ 0.79
CPS1P31327 BATF-202ENST00000555504 361 ntTSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.02■□□□□ 0.79
CPS1P31327 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC20.02■□□□□ 0.79
CPS1P31327 AC087072.1-201ENST00000603727 421 ntBASIC20.02■□□□□ 0.79
CPS1P31327 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC20.02■□□□□ 0.79
CPS1P31327 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CPS1P31327 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC20.02■□□□□ 0.79
CPS1P31327 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.01■□□□□ 0.79
CPS1P31327 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPS1P31327 U73169.1-201ENST00000395152 367 ntBASIC20.01■□□□□ 0.79
CPS1P31327 AC006987.1-201ENST00000413610 527 ntBASIC20.01■□□□□ 0.79
CPS1P31327 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 RPL18AP15-201ENST00000430258 517 ntBASIC20.01■□□□□ 0.79
CPS1P31327 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 AC133141.1-201ENST00000443015 339 ntBASIC20.01■□□□□ 0.79
CPS1P31327 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC20.01■□□□□ 0.79
CPS1P31327 RN7SL523P-201ENST00000484401 298 ntBASIC20.01■□□□□ 0.79
CPS1P31327 CMC2-204ENST00000562713 573 ntTSL 3 BASIC20.01■□□□□ 0.79
CPS1P31327 CMC2-209ENST00000565108 399 ntTSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC20.01■□□□□ 0.79
CPS1P31327 MIR4640-201ENST00000581824 90 ntBASIC20.01■□□□□ 0.79
CPS1P31327 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPS1P31327 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.01■□□□□ 0.79
CPS1P31327 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPS1P31327 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.01■□□□□ 0.79
CPS1P31327 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CPS1P31327 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20■□□□□ 0.79
CPS1P31327 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CPS1P31327 AC117503.4-201ENST00000623229 1418 ntBASIC20■□□□□ 0.79
CPS1P31327 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20■□□□□ 0.79
CPS1P31327 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC20■□□□□ 0.79
CPS1P31327 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20■□□□□ 0.79
CPS1P31327 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CPS1P31327 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 MIR339-201ENST00000362153 94 ntBASIC20■□□□□ 0.79
CPS1P31327 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms