Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA10P31260 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA10P31260 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA10P31260 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA10P31260 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA10P31260 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 AC013268.4-201ENST00000637413 2228 ntBASIC17.49■□□□□ 0.39
HOXA10P31260 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA10P31260 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA10P31260 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HOXA10P31260 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA10P31260 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HOXA10P31260 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA10P31260 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 PSAT1P2-201ENST00000426107 972 ntBASIC17.48■□□□□ 0.39
HOXA10P31260 KRT18P62-201ENST00000446618 1287 ntBASIC17.48■□□□□ 0.39
HOXA10P31260 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.48■□□□□ 0.39
HOXA10P31260 EIF5AP2-201ENST00000585668 1047 ntBASIC17.48■□□□□ 0.39
HOXA10P31260 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 AP003392.6-201ENST00000607709 325 ntBASIC17.48■□□□□ 0.39
HOXA10P31260 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXA10P31260 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA10P31260 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA10P31260 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA10P31260 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HOXA10P31260 AC138761.6-201ENST00000583997 1423 ntBASIC17.47■□□□□ 0.39
HOXA10P31260 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
HOXA10P31260 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HOXA10P31260 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HOXA10P31260 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA10P31260 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 ALG1L3P-201ENST00000503331 765 ntBASIC17.47■□□□□ 0.39
HOXA10P31260 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA10P31260 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXA10P31260 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXA10P31260 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA10P31260 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA10P31260 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.47■□□□□ 0.39
HOXA10P31260 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA10P31260 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HOXA10P31260 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HOXA10P31260 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA10P31260 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA10P31260 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA10P31260 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HOXA10P31260 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA10P31260 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HOXA10P31260 AC073210.1-201ENST00000414799 232 ntBASIC17.46■□□□□ 0.39
HOXA10P31260 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA10P31260 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA10P31260 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HOXA10P31260 AC083801.1-201ENST00000491689 358 ntBASIC17.46■□□□□ 0.39
HOXA10P31260 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms