Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
PTPN6P29350 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.92□□□□□ -0.18
PTPN6P29350 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PTPN6P29350 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.92□□□□□ -0.18
PTPN6P29350 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
PTPN6P29350 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 ALG3P1-201ENST00000508806 1114 ntBASIC13.92□□□□□ -0.18
PTPN6P29350 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.92□□□□□ -0.18
PTPN6P29350 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.92□□□□□ -0.18
PTPN6P29350 SORD2P-201ENST00000558556 1069 ntBASIC13.92□□□□□ -0.18
PTPN6P29350 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.92□□□□□ -0.18
PTPN6P29350 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.92□□□□□ -0.18
PTPN6P29350 AC017083.2-201ENST00000608069 979 ntBASIC13.92□□□□□ -0.18
PTPN6P29350 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.92□□□□□ -0.18
PTPN6P29350 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 AC005252.3-201ENST00000623855 2258 ntBASIC13.92□□□□□ -0.18
PTPN6P29350 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PTPN6P29350 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PTPN6P29350 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 MIR1909-201ENST00000411312 80 ntBASIC13.91□□□□□ -0.18
PTPN6P29350 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.91□□□□□ -0.18
PTPN6P29350 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 GNRHR2-203ENST00000581100 1187 ntBASIC13.91□□□□□ -0.18
PTPN6P29350 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 PTENP1-202ENST00000532280 3996 ntBASIC13.91□□□□□ -0.18
PTPN6P29350 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.91□□□□□ -0.18
PTPN6P29350 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.91□□□□□ -0.18
PTPN6P29350 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.91□□□□□ -0.18
PTPN6P29350 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PTPN6P29350 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PTPN6P29350 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PTPN6P29350 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms