Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.57■□□□□ 0.56
RXRBP28702 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 AL591499.1-201ENST00000307155 1153 ntBASIC18.57■□□□□ 0.56
RXRBP28702 OR7E12P-201ENST00000344740 973 ntBASIC18.57■□□□□ 0.56
RXRBP28702 U3.5-201ENST00000363448 216 ntBASIC18.57■□□□□ 0.56
RXRBP28702 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC18.57■□□□□ 0.56
RXRBP28702 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 ACTG1P23-201ENST00000437653 1074 ntBASIC18.57■□□□□ 0.56
RXRBP28702 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 FAM213AP2-201ENST00000521579 683 ntBASIC18.57■□□□□ 0.56
RXRBP28702 FAM187B2P-201ENST00000577135 713 ntBASIC18.57■□□□□ 0.56
RXRBP28702 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.57■□□□□ 0.56
RXRBP28702 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.57■□□□□ 0.56
RXRBP28702 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.57■□□□□ 0.56
RXRBP28702 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.57■□□□□ 0.56
RXRBP28702 AC091905.3-201ENST00000624959 234 ntBASIC18.57■□□□□ 0.56
RXRBP28702 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.57■□□□□ 0.56
RXRBP28702 SALL4P6-201ENST00000429385 1691 ntBASIC18.57■□□□□ 0.56
RXRBP28702 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RXRBP28702 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
RXRBP28702 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 KHSRPP1-201ENST00000427983 1768 ntBASIC18.56■□□□□ 0.56
RXRBP28702 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RXRBP28702 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 TUBB8P9-201ENST00000422534 1276 ntBASIC18.56■□□□□ 0.56
RXRBP28702 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 TUBB8P10-201ENST00000430210 1279 ntBASIC18.56■□□□□ 0.56
RXRBP28702 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 AC005722.1-201ENST00000431878 964 ntBASIC18.56■□□□□ 0.56
RXRBP28702 AC015818.1-201ENST00000451011 244 ntBASIC18.56■□□□□ 0.56
RXRBP28702 RN7SL33P-201ENST00000462543 342 ntBASIC18.56■□□□□ 0.56
RXRBP28702 RN7SL340P-201ENST00000470792 296 ntBASIC18.56■□□□□ 0.56
RXRBP28702 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC18.56■□□□□ 0.56
RXRBP28702 AC132825.4-202ENST00000578792 434 ntBASIC18.56■□□□□ 0.56
RXRBP28702 MIR4309-201ENST00000582498 83 ntBASIC18.56■□□□□ 0.56
RXRBP28702 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC18.56■□□□□ 0.56
RXRBP28702 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RXRBP28702 AC139100.2-201ENST00000616901 662 ntBASIC18.56■□□□□ 0.56
RXRBP28702 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RXRBP28702 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 AL139384.1-201ENST00000612143 3047 ntBASIC18.56■□□□□ 0.56
RXRBP28702 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RXRBP28702 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RXRBP28702 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RXRBP28702 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 TBC1D27-202ENST00000424239 1573 ntBASIC18.55■□□□□ 0.56
RXRBP28702 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 MTHFR-217ENST00000641820 1569 ntBASIC18.55■□□□□ 0.56
RXRBP28702 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 TUBA3GP-201ENST00000410028 1325 ntBASIC18.55■□□□□ 0.56
RXRBP28702 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.55■□□□□ 0.56
RXRBP28702 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RXRBP28702 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RXRBP28702 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.55■□□□□ 0.56
RXRBP28702 AC113398.1-201ENST00000464124 406 ntBASIC18.55■□□□□ 0.56
RXRBP28702 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.55■□□□□ 0.56
RXRBP28702 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.55■□□□□ 0.56
RXRBP28702 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.55■□□□□ 0.56
RXRBP28702 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC18.55■□□□□ 0.56
RXRBP28702 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.55■□□□□ 0.56
RXRBP28702 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms