Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
PTX3P26022 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.1□□□□□ -0.15
PTX3P26022 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.1□□□□□ -0.15
PTX3P26022 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PTX3P26022 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PTX3P26022 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.1□□□□□ -0.15
PTX3P26022 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTX3P26022 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.1□□□□□ -0.15
PTX3P26022 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 LINC01230-201ENST00000625222 3017 ntBASIC14.09□□□□□ -0.15
PTX3P26022 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.09□□□□□ -0.15
PTX3P26022 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.09□□□□□ -0.15
PTX3P26022 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.09□□□□□ -0.15
PTX3P26022 AL162274.1-201ENST00000617191 1098 ntBASIC14.09□□□□□ -0.15
PTX3P26022 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.09□□□□□ -0.15
PTX3P26022 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTX3P26022 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PTX3P26022 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.08□□□□□ -0.15
PTX3P26022 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTX3P26022 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.08□□□□□ -0.15
PTX3P26022 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PTX3P26022 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PTX3P26022 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PTX3P26022 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.08□□□□□ -0.16
PTX3P26022 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PTX3P26022 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.08□□□□□ -0.16
PTX3P26022 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PTX3P26022 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.08□□□□□ -0.16
PTX3P26022 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.08□□□□□ -0.16
PTX3P26022 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PTX3P26022 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PTX3P26022 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.08□□□□□ -0.16
PTX3P26022 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.08□□□□□ -0.16
PTX3P26022 AL355994.2-201ENST00000447882 704 ntBASIC14.08□□□□□ -0.16
PTX3P26022 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms