Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
RAB4AP20338 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.31□□□□□ -0.6
RAB4AP20338 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.31□□□□□ -0.6
RAB4AP20338 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 SAPCD2P3-201ENST00000455031 850 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.31□□□□□ -0.6
RAB4AP20338 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC073648.2-201ENST00000510116 352 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 AF238378.1-201ENST00000526806 358 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC091304.2-201ENST00000564639 760 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 MIR4751-201ENST00000578027 74 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 AC097359.3-201ENST00000603982 1210 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 AC084364.1-201ENST00000551967 1556 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
RAB4AP20338 AL136982.4-201ENST00000437689 1740 ntBASIC11.31□□□□□ -0.6
RAB4AP20338 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.31□□□□□ -0.6
RAB4AP20338 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RAB4AP20338 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RAB4AP20338 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.3□□□□□ -0.6
RAB4AP20338 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 AKR1C7P-201ENST00000305623 895 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.3□□□□□ -0.6
RAB4AP20338 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.3□□□□□ -0.6
RAB4AP20338 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 SPTSSB-204ENST00000617024 1292 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RAB4AP20338 AC022497.1-201ENST00000624916 3691 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 AC018445.4-201ENST00000624066 2291 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 PCDHB19P-202ENST00000625133 2914 ntBASIC11.3□□□□□ -0.6
RAB4AP20338 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
RAB4AP20338 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.3□□□□□ -0.6
RAB4AP20338 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB4AP20338 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms