Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.81□□□□□ -0.36
CCL2P13500 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL2P13500 RNA5SP412-201ENST00000516234 123 ntBASIC12.81□□□□□ -0.36
CCL2P13500 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
CCL2P13500 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL2P13500 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.81□□□□□ -0.36
CCL2P13500 SHC1P1-201ENST00000425230 1745 ntBASIC12.81□□□□□ -0.36
CCL2P13500 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CCL2P13500 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CCL2P13500 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL2P13500 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL2P13500 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 AC139712.1-201ENST00000378256 1875 ntBASIC12.8□□□□□ -0.36
CCL2P13500 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL2P13500 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL2P13500 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL2P13500 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 MIR326-201ENST00000362220 95 ntBASIC12.8□□□□□ -0.36
CCL2P13500 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCL2P13500 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL2P13500 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CICP12-201ENST00000455801 843 ntBASIC12.8□□□□□ -0.36
CCL2P13500 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL2P13500 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL2P13500 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 EEF1DP1-201ENST00000585891 896 ntBASIC12.8□□□□□ -0.36
CCL2P13500 AC012617.1-204ENST00000586340 2305 ntBASIC12.8□□□□□ -0.36
CCL2P13500 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL2P13500 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL2P13500 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms