Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CDH1P12830 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH1P12830 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH1P12830 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH1P12830 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
CDH1P12830 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 MIR1909-201ENST00000411312 80 ntBASIC14.34□□□□□ -0.11
CDH1P12830 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH1P12830 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH1P12830 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH1P12830 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH1P12830 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH1P12830 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDH1P12830 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH1P12830 AHCYP2-201ENST00000430630 1300 ntBASIC14.34□□□□□ -0.11
CDH1P12830 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH1P12830 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
CDH1P12830 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH1P12830 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
CDH1P12830 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH1P12830 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CDH1P12830 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH1P12830 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CDH1P12830 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.33□□□□□ -0.11
CDH1P12830 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 AC026954.1-201ENST00000429771 1293 ntBASIC14.33□□□□□ -0.12
CDH1P12830 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH1P12830 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH1P12830 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 COX5BP1-201ENST00000507622 393 ntBASIC14.33□□□□□ -0.12
CDH1P12830 AC022447.6-201ENST00000515522 438 ntBASIC14.33□□□□□ -0.12
CDH1P12830 AC104989.1-201ENST00000519711 778 ntBASIC14.33□□□□□ -0.12
CDH1P12830 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CDH1P12830 MIR4683-201ENST00000579659 81 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms