Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
COL6A2P12110 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 RN7SKP175-201ENST00000408472 289 ntBASIC14.51□□□□□ -0.09
COL6A2P12110 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.51□□□□□ -0.09
COL6A2P12110 BAATP1-201ENST00000412284 1225 ntBASIC14.51□□□□□ -0.09
COL6A2P12110 FAM207CP-201ENST00000443486 507 ntBASIC14.51□□□□□ -0.09
COL6A2P12110 AC012441.1-201ENST00000446669 685 ntBASIC14.51□□□□□ -0.09
COL6A2P12110 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.51□□□□□ -0.09
COL6A2P12110 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.51□□□□□ -0.09
COL6A2P12110 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.51□□□□□ -0.09
COL6A2P12110 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.51□□□□□ -0.09
COL6A2P12110 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL6A2P12110 AJ011932.1-201ENST00000621707 465 ntBASIC14.51□□□□□ -0.09
COL6A2P12110 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.51□□□□□ -0.09
COL6A2P12110 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL6A2P12110 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.51□□□□□ -0.09
COL6A2P12110 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.51□□□□□ -0.09
COL6A2P12110 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.51□□□□□ -0.09
COL6A2P12110 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
COL6A2P12110 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL6A2P12110 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.5□□□□□ -0.09
COL6A2P12110 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.5□□□□□ -0.09
COL6A2P12110 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.5□□□□□ -0.09
COL6A2P12110 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.5□□□□□ -0.09
COL6A2P12110 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.5□□□□□ -0.09
COL6A2P12110 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 TCAF1P1-201ENST00000414990 2232 ntBASIC14.5□□□□□ -0.09
COL6A2P12110 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL6A2P12110 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.5□□□□□ -0.09
COL6A2P12110 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
COL6A2P12110 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
COL6A2P12110 AC009093.10-201ENST00000641956 1442 ntBASIC14.49□□□□□ -0.09
COL6A2P12110 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
COL6A2P12110 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
COL6A2P12110 AL138709.1-201ENST00000614840 1693 ntBASIC14.49□□□□□ -0.09
COL6A2P12110 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
COL6A2P12110 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL6A2P12110 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms