Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TOP2AP11388 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TOP2AP11388 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC24.71■■□□□ 1.55
TOP2AP11388 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TOP2AP11388 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TOP2AP11388 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC24.71■■□□□ 1.55
TOP2AP11388 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC24.71■■□□□ 1.55
TOP2AP11388 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC24.71■■□□□ 1.55
TOP2AP11388 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC24.71■■□□□ 1.55
TOP2AP11388 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
TOP2AP11388 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TOP2AP11388 HLA-DMA-202ENST00000395303 1007 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 DKKL1P1-201ENST00000400550 698 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 HNRNPA1P58-201ENST00000403629 610 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC24.71■■□□□ 1.55
TOP2AP11388 IFNWP2-201ENST00000431203 580 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 GULOP-201ENST00000454030 748 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC24.71■■□□□ 1.55
TOP2AP11388 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC24.71■■□□□ 1.55
TOP2AP11388 URAHP-205ENST00000610227 398 ntBASIC24.71■■□□□ 1.55
TOP2AP11388 POR-201ENST00000394893 2532 ntTSL 5 BASIC24.71■■□□□ 1.55
TOP2AP11388 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
TOP2AP11388 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
TOP2AP11388 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TOP2AP11388 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 AC023824.1-201ENST00000562945 2975 ntBASIC24.7■■□□□ 1.54
TOP2AP11388 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TOP2AP11388 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
TOP2AP11388 ENPP7P8-202ENST00000527856 1345 ntBASIC24.7■■□□□ 1.54
TOP2AP11388 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TOP2AP11388 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 SIRPB3P-201ENST00000340424 1216 ntBASIC24.7■■□□□ 1.54
TOP2AP11388 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC24.7■■□□□ 1.54
TOP2AP11388 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TOP2AP11388 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC24.7■■□□□ 1.54
TOP2AP11388 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC24.7■■□□□ 1.54
TOP2AP11388 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC24.7■■□□□ 1.54
TOP2AP11388 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
TOP2AP11388 AC010531.8-201ENST00000623341 685 ntBASIC24.7■■□□□ 1.54
TOP2AP11388 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TOP2AP11388 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TOP2AP11388 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC24.7■■□□□ 1.54
TOP2AP11388 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TOP2AP11388 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
TOP2AP11388 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC24.69■■□□□ 1.54
TOP2AP11388 AC005722.1-201ENST00000431878 964 ntBASIC24.69■■□□□ 1.54
TOP2AP11388 BCRP4-201ENST00000506079 804 ntBASIC24.69■■□□□ 1.54
TOP2AP11388 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC24.69■■□□□ 1.54
TOP2AP11388 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC24.69■■□□□ 1.54
TOP2AP11388 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TOP2AP11388 PAUPAR-201ENST00000630360 2965 ntBASIC24.69■■□□□ 1.54
TOP2AP11388 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
TOP2AP11388 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 AC092384.3-202ENST00000564646 2873 ntBASIC24.69■■□□□ 1.54
TOP2AP11388 SALL4P6-201ENST00000429385 1691 ntBASIC24.69■■□□□ 1.54
TOP2AP11388 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TOP2AP11388 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC24.68■■□□□ 1.54
TOP2AP11388 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TOP2AP11388 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TOP2AP11388 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TOP2AP11388 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
TOP2AP11388 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TOP2AP11388 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC24.68■■□□□ 1.54
TOP2AP11388 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC24.68■■□□□ 1.54
TOP2AP11388 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC24.68■■□□□ 1.54
TOP2AP11388 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TOP2AP11388 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC24.68■■□□□ 1.54
TOP2AP11388 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC24.68■■□□□ 1.54
TOP2AP11388 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC24.68■■□□□ 1.54
TOP2AP11388 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC24.68■■□□□ 1.54
TOP2AP11388 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC24.68■■□□□ 1.54
TOP2AP11388 FGD5P1-202ENST00000614866 2498 ntBASIC24.68■■□□□ 1.54
TOP2AP11388 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TOP2AP11388 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC24.68■■□□□ 1.54
TOP2AP11388 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TOP2AP11388 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC24.68■■□□□ 1.54
TOP2AP11388 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 USP35-204ENST00000530267 2419 ntTSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 AC126177.1-201ENST00000547829 2218 ntBASIC24.67■■□□□ 1.54
TOP2AP11388 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms